Catrin (ver.2)
Catalogue of Transcriptional Regulatory Interactions


Catrin Data Sources


High Quality Subset (Ratio = 1.0; Unique sources > 2)

Source TF Targets Unique Predictions
 
AURA1516441704
CollecTRI274554171
GTRD69867816578
hTFtarget1021130331614
JASPAR4668469354
ReMap20222551484558431
TFTGD75810927
TRRUST2104620
 
Total unique:4381504159082



Complete Data Set

Source TF Targets Unique Predictions
 
AURA15014713214106
ChEA8619822171013
CollecTRI1184662231199
GTRD26821731421540
hTFtarget49125103994863
JASPAR18523437286515
ReMap20221188249325111141
TFTGD5308250613420
TRRUST79224910
 
Total unique:2034337246783350



References


Data First PMID Date Downloaded
AURA 22057158 Mar, 2023
ChEA 20709693 2019
GTRD 27924024 Dec, 2020
JASPAR 14681366 2024
ReMap2022 25477382 2022
hTFtarget 32858223 Aug, 2020
TFTGD 27426982 Jul, 2016
CollecTRI 37843125 2023
TRRUST 29087512 2017




Some other Jurisica Lab , ( Schroeder Arthritis Institute, Krembil Research Institute ) projects:

- Integrated Interactions Database: Search Tissue specific protein interactions across species.

- Data Visualization and analysis with NAViGaTOR: Scalable network visualization and visual data mining graphic tool powered by OpenGL.

- MicroRNA Data Integration Portal (mirDIP): Find microRNAs that target a gene, or genes targeted by a microRNA, in Homo sapiens.

- Human gene-pathway associations (pathDIP) : Search for known pathway memberships or predicted pathway associations.

All contents copyright: Jurisica Lab, Schroeder Arthritis Institute, Krembil Research Institute - the University Health Network, Toronto, Canada. Last modified July 12, 2024, version 2.0.5.2 (Database version: 2.0.1.1)

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